CEPLAS ARC Training


May, 2024

Dominik Brilhaus (CEPLAS)
Stella Eggels (DataPLANT)

Tentative agenda

Morning

Time Topics
09:00 - 09:15 Welcome, Intro RDM and NFDI
09:15 - 09:45 Overview DataPLANT, and DataPLANT Tool chain
09:45 - 10:30 Hands-on ARCitect
10:30 - 10:45 Short break ☕
10:45 - 11:45 Intro and Hands-on DataHUB
11:45 - 12:00 Q & A

Afternoon

Time Topics
12:00 - 13:00 Lunch break 🍕
13:00 - 14:00 Intro and Hands-on Metadata annotation with SWATE
14:00 - 15:00 Create your own ARC
15:00 - 15:15 Short break ☕
15:15 - 16:30 Create your own ARC
16:30 - 17:00 Q & A and wrap-up

House-keeping

  • Use the pad to raise questions and feedback
  • Copy / paste links (hands-on)

Training Materials

Slides are shared via DataPLANT knowledge base

Resources – join the open source movement

DataPLANT (nfdi4plants)

Website: https://www.nfdi4plants.de/
Knowledge Base: https://www.nfdi4plants.de/nfdi4plants.knowledgebase/
DataHUB: https://git.nfdi4plants.org

GitHub: https://github.com/nfdi4plants
HelpDesk: https://helpdesk.nfdi4plants.org

💡 You can help us by raising issues, bugs, ideas...

Continuous support

Data managers in Düsseldorf, Cologne, Jülich and close by (CEPLAS, MibiNet, TRR341) offer support.

  1. Slack Workspace for ad hoc support
  2. Monthly user meeting (2nd Friday of the month)

→ Details.

Introduce yourself

  • Lab
  • CEPLAS / TRR / MibiNet / ?
  • Used code / programming language before
  • Experience with Git / GitLab / GitHub?
  • Have an ORCID
  • My motivation / expectation
  • My favorite lab assay

Let's draw a typical lab workflow 📝

BYOD – Goals

  • Move existing datasets into ARCs
  • Share them via the DataHUB
  • First few steps into ARCs
  • You or collaborators can pick them up from there

TODO before final - update agenda